[Hub]/) : Traits : Arm fat percentage (right) : ← →

chr17:39,993,748-41,538,783

Best TWAS P=2.9e-11 · Best GWAS P=1.14e-11 conditioned to 1

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	GTEx	Adipose Subcutaneous	TUBG2	0.21	0.18	enet	17	0.26	2.1e-21	-4.0	-5.4	6.6e-08	-0.75	0.92	0.08	FALSE
2	GTEx	Artery Tibial	HSD17B1	0.12	0.07	lasso	9	0.07	4.4e-06	-5.0	-5.2	1.7e-07	-0.60	0.30	0.69	FALSE
3	GTEx	Artery Tibial	RP11-400F19.6	0.07	0.01	lasso	5	0.01	3.0e-02	6.8	-6.6	3.0e-11	-0.97	0.00	0.99	FALSE
4	GTEx	Brain Caudate basal ganglia	TUBG2	0.39	0.24	enet	45	0.25	7.7e-08	-5.0	-6.0	1.9e-09	-0.67	0.12	0.87	FALSE
5	GTEx	Cells Transformed fibroblasts	TUBG2	0.16	0.18	lasso	4	0.17	6.5e-13	-5.0	-5.2	2.0e-07	-0.66	0.99	0.01	FALSE
6	GTEx	Cells Transformed fibroblasts	CNTNAP1	0.07	0.08	lasso	5	0.06	1.9e-05	5.0	5.3	1.4e-07	0.73	0.12	0.73	FALSE
7	GTEx	Cells Transformed fibroblasts	CTD-3193K9.3	0.07	0.08	lasso	3	0.07	1.2e-05	5.0	5.1	2.8e-07	0.71	0.18	0.74	FALSE
8	GTEx	Esophagus Mucosa	TUBG2	0.09	0.09	lasso	4	0.11	5.5e-08	-5.0	-6.4	1.6e-10	-0.84	0.02	0.98	FALSE
9	GTEx	Esophagus Muscularis	TUBG2	0.14	0.16	enet	17	0.06	2.1e-04	-5.0	-5.2	1.8e-07	-0.66	0.96	0.04	FALSE
10	GTEx	Esophagus Muscularis	NAGLU	0.29	0.09	lasso	5	0.07	6.2e-05	5.5	-5.5	4.1e-08	-0.82	0.28	0.62	FALSE
11	GTEx	Esophagus Muscularis	RP11-400F19.8	0.17	0.05	lasso	4	0.02	3.9e-02	5.5	-5.8	8.6e-09	-0.70	0.04	0.43	FALSE
12	GTEx	Lung	TUBG2	0.08	0.02	enet	8	0.04	7.8e-04	-5.0	-5.3	9.5e-08	-0.74	0.08	0.76	FALSE
13	GTEx	Muscle Skeletal	TUBG2	0.12	0.09	lasso	8	0.10	1.1e-09	5.7	-5.4	8.2e-08	-0.91	0.00	1.00	FALSE
14	GTEx	Nerve Tibial	RP11-400F19.8	0.10	0.03	lasso	3	0.02	8.2e-03	5.5	-5.3	1.4e-07	-0.83	0.14	0.25	FALSE
15	GTEx	Pancreas	CNTNAP1	0.13	0.09	lasso	7	0.09	9.1e-05	5.3	5.7	9.4e-09	0.82	0.16	0.60	FALSE
16	GTEx	Pancreas	FAM134C	0.08	0.04	enet	9	0.03	2.0e-02	4.1	5.2	2.3e-07	0.80	0.10	0.62	FALSE
17	GTEx	Pancreas	CTD-3193K9.3	0.12	0.07	lasso	5	0.07	5.7e-04	5.3	5.7	1.1e-08	0.83	0.13	0.50	FALSE
18	GTEx	Skin Not Sun Exposed Suprapubic	TUBG2	0.15	0.13	lasso	5	0.12	4.0e-07	6.8	-6.7	2.9e-11	-0.99	0.00	1.00	TRUE
19	GTEx	Skin Sun Exposed Lower leg	TUBG2	0.14	0.10	enet	25	0.12	4.9e-10	-4.9	-5.9	4.3e-09	-0.83	0.01	0.99	FALSE
20	GTEx	Stomach	HSD17B1P1	0.10	0.04	lasso	3	0.04	6.9e-03	5.0	-5.9	2.8e-09	-0.76	0.09	0.38	FALSE
21	GTEx	Thyroid	HSD17B1P1	0.04	0.00	enet	9	0.00	2.2e-01	-5.0	-6.0	1.8e-09	-0.74	0.06	0.75	FALSE
22	METSIM	Adipose	TUBG2	0.08	0.09	lasso	6	0.09	5.2e-13	4.1	-5.2	2.0e-07	-0.79	0.97	0.03	FALSE
23	The Cancer Genome Atlas	Breast Invasive Carcinoma	TUBG2	0.02	0.01	lasso	2	0.01	1.7e-02	5.7	-5.7	1.3e-08	-0.86	0.00	0.80	FALSE
24	The Cancer Genome Atlas	Brain Lower Grade Glioma	HSD17B1	0.30	0.05	enet	14	0.06	2.8e-07	-4.2	-5.6	2.4e-08	-0.71	0.44	0.53	FALSE
25	The Cancer Genome Atlas	Lung Adenocarcinoma	TUBG2	0.07	0.01	enet	7	0.02	2.2e-03	5.7	-5.6	1.7e-08	-0.80	0.00	0.89	FALSE
26	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	PSMC3IP	0.02	0.02	blup	33	0.02	9.8e-04	-5.0	-6.0	1.9e-09	-0.78	0.03	0.76	FALSE
27	The Cancer Genome Atlas	Prostate Adenocarcinoma	TUBG2	0.04	0.02	blup	29	0.02	1.5e-03	-4.9	-5.6	2.4e-08	-0.70	0.02	0.69	FALSE
28	The Cancer Genome Atlas	Thyroid Carcinoma	HSD17B1	0.05	0.07	blup	29	0.07	2.3e-07	-4.0	-5.5	3.7e-08	-0.76	0.66	0.33	FALSE
29	The Cancer Genome Atlas	Thyroid Carcinoma	TUBG2	0.20	0.13	blup	29	0.17	1.7e-16	5.7	-5.7	1.3e-08	-0.84	0.00	1.00	FALSE