TWAS
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Traits
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Arm fat-free mass (right)
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chr7:17,133,294-18,674,435
Best TWAS P=4.48e-08 · Best GWAS P=2.99e-09 conditioned to 0.00149
17.2M
17.4M
17.6M
17.8M
18M
18.2M
18.4M
18.6M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Colon Adenocarcinoma
SNX13
0.15
0.16
lasso
3
0.18
1.7e-10
5.4
-5.5
4.5e-08
-0.64
0.04
0.96
TRUE
1
GTEx
Testis
SNX13
0.21
0.14
enet
15
0.13
2.0e-06
-5.1
5.3
1.2e-07
0.78
0.20
0.80
FALSE