TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Arm fat-free mass (right)
:
←
→
chr9:93,476,005-96,126,104
Best TWAS P=3.58e-10 · Best GWAS P=4.94e-10 conditioned to 1
93.5M
94M
94.5M
95M
95.5M
96M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Testis
NFIL3
0.47
0.33
enet
8
0.29
3.8e-13
-6.2
6.3
3.6e-10
-0.99
0.00
1.00
TRUE
4
The Cancer Genome Atlas
Thyroid Carcinoma
IPPK
0.03
0.04
blup
50
0.04
6.7e-05
-5.5
5.6
2.6e-08
0.03
0.01
0.98
TRUE
1
GTEx
Skin Sun Exposed Lower leg
IPPK
0.17
0.07
enet
8
0.07
2.7e-06
-5.9
5.3
1.1e-07
0.03
0.02
0.98
FALSE
3
The Cancer Genome Atlas
Lung Adenocarcinoma
ECM2
0.10
0.04
lasso
2
0.04
4.2e-05
-5.4
-5.2
1.8e-07
-0.03
0.00
0.99
FALSE