[Hub]/) : Traits : Arm predicted mass (right) :

chr20:46,840,115-48,591,758

Best TWAS P=5.99e-09 · Best GWAS P=1.07e-08 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Cells Transformed fibroblasts STAU1 0.08 0.03 lasso 6 0.02 2.3e-02 4.8 5.2 1.8e-07 0.78 0.08 0.78 FALSE
2 GTEx Esophagus Mucosa CSE1L 0.09 0.06 lasso 4 0.06 6.9e-05 5.4 -5.2 2.5e-07 -0.75 0.06 0.92 FALSE
3 GTEx Skin Sun Exposed Lower leg CSE1L 0.08 0.03 lasso 2 0.03 9.5e-04 5.5 -5.3 1.2e-07 -0.75 0.10 0.83 FALSE
4 GTEx Testis ARFGEF2 0.20 0.20 lasso 7 0.24 5.4e-11 4.8 -5.4 7.6e-08 -0.84 0.11 0.89 FALSE
5 METSIM Adipose ARFGEF2 0.04 0.03 lasso 12 0.02 9.8e-05 5.6 -5.8 6.0e-09 -0.96 0.02 0.98 TRUE
6 NTR Blood SNORD12B 0.03 0.05 lasso 8 0.05 1.9e-14 5.7 -5.8 6.6e-09 -0.98 0.01 0.99 FALSE
7 The Cancer Genome Atlas Brain Lower Grade Glioma ARFGEF2 0.05 0.04 lasso 5 0.05 3.2e-06 5.2 -5.7 1.1e-08 -0.87 0.01 0.99 FALSE
8 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma C20orf199 0.05 0.06 lasso 4 0.06 1.0e-04 5.7 5.7 1.3e-08 1.00 0.00 0.96 FALSE
9 The Cancer Genome Atlas Thyroid Carcinoma DDX27 0.08 0.05 lasso 3 0.05 1.9e-05 5.7 5.2 1.9e-07 0.92 0.01 0.98 FALSE