TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Arm fat mass (left)
:
←
→
chr16:14,379,931-15,886,243
Best TWAS P=5.16e-08 · Best GWAS P=9.29e-06 conditioned to 0.565
14.4M
14.6M
14.8M
15M
15.2M
15.4M
15.6M
15.8M
0
1
2
3
4
5
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Heart Left Ventricle
RRN3
0.24
0.12
lasso
7
0.17
2.2e-09
4.3
-5.5
5.2e-08
-0.87
0.00
0.93
TRUE
3
NTR
Blood
PDXDC1
0.12
0.12
enet
26
0.15
1.3e-46
-3.9
5.3
1.1e-07
0.74
0.02
0.73
FALSE
2
GTEx
Nerve Tibial
NTAN1
0.07
0.00
enet
14
0.00
1.7e-01
4.4
5.2
1.5e-07
0.46
0.00
0.06
FALSE