[Hub]/) : Traits : Arm fat-free mass (left) : ← →

chr2:85,083,503-86,518,249

Best TWAS P=4.45e-13 · Best GWAS P=1.24e-10 conditioned to 0.0835

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
27	The Cancer Genome Atlas	Prostate Adenocarcinoma	GGCX	0.04	0.02	blup	44	0.02	2.7e-03	6.2	7.2	4.5e-13	0.72	0.02	0.96	TRUE
16	GTEx	Pancreas	VAMP5	0.29	0.09	enet	4	0.05	3.2e-03	6.3	-6.8	7.5e-12	-0.66	0.02	0.82	FALSE
18	GTEx	Skin Sun Exposed Lower leg	GGCX	0.15	0.11	lasso	3	0.18	7.9e-15	5.2	6.7	1.8e-11	0.69	0.08	0.92	FALSE
17	GTEx	Skin Not Sun Exposed Suprapubic	GGCX	0.13	0.04	enet	11	0.06	3.9e-04	5.2	6.7	2.4e-11	0.64	0.10	0.76	FALSE
3	GTEx	Artery Tibial	GGCX	0.29	0.22	enet	14	0.24	6.3e-19	5.3	6.5	9.1e-11	0.69	0.79	0.20	FALSE
15	GTEx	Nerve Tibial	GGCX	0.38	0.30	lasso	7	0.33	6.5e-24	5.3	6.4	1.4e-10	0.72	0.82	0.18	FALSE
20	GTEx	Thyroid	GGCX	0.30	0.17	enet	10	0.23	1.4e-17	5.2	6.3	2.2e-10	0.74	0.77	0.23	FALSE
19	GTEx	Testis	GGCX	0.38	0.36	enet	25	0.40	8.6e-19	5.2	6.3	3.5e-10	0.72	0.75	0.25	FALSE
26	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	VAMP8	0.06	0.01	enet	15	0.02	2.1e-02	6.3	6.2	6.1e-10	0.45	0.01	0.83	FALSE
14	GTEx	Muscle Skeletal	GGCX	0.10	0.04	enet	11	0.02	2.7e-03	5.3	6.2	6.5e-10	0.78	0.12	0.88	FALSE
5	GTEx	Brain Cerebellum	GGCX	0.54	0.30	lasso	10	0.34	6.0e-11	5.2	6.1	7.8e-10	0.75	0.65	0.35	FALSE
12	GTEx	Esophagus Muscularis	GGCX	0.14	0.12	lasso	9	0.12	1.1e-07	5.3	6.1	1.0e-09	0.75	0.41	0.59	FALSE
2	GTEx	Artery Aorta	GGCX	0.23	0.22	lasso	6	0.23	5.5e-13	5.3	6.1	1.1e-09	0.74	0.67	0.33	FALSE
23	YFS	Blood	VAMP8	0.15	0.15	enet	37	0.18	2.2e-55	5.5	-5.9	4.2e-09	-0.75	0.72	0.28	FALSE
8	GTEx	Colon Transverse	GGCX	0.26	0.28	lasso	3	0.28	1.4e-13	5.2	5.8	6.4e-09	0.73	0.76	0.24	FALSE
21	GTEx	Whole Blood	GGCX	0.15	0.14	lasso	4	0.15	1.7e-13	5.2	5.7	1.2e-08	0.73	0.81	0.19	FALSE
9	GTEx	Esophagus Gastroesophageal Junction	GGCX	0.24	0.16	lasso	6	0.12	4.3e-05	5.2	5.7	1.5e-08	0.74	0.16	0.74	FALSE
10	GTEx	Esophagus Mucosa	GGCX	0.29	0.21	enet	30	0.27	5.8e-18	5.5	5.6	1.8e-08	0.62	0.69	0.31	FALSE
25	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	VAMP5	0.07	0.04	blup	44	0.05	2.1e-06	6.4	-5.6	2.8e-08	-0.49	0.01	0.98	FALSE
28	The Cancer Genome Atlas	Soft Tissue Sarcoma	GGCX	0.04	0.03	lasso	2	0.03	1.1e-02	5.5	5.5	4.3e-08	0.70	0.06	0.07	FALSE
4	GTEx	Brain Cerebellar Hemisphere	GGCX	0.46	0.41	enet	16	0.48	5.3e-14	4.4	5.4	7.7e-08	0.72	0.84	0.16	FALSE
11	GTEx	Esophagus Mucosa	TMEM150A	0.10	0.05	enet	5	0.05	3.2e-04	5.2	-5.4	7.8e-08	-0.80	0.13	0.76	FALSE
6	GTEx	Brain Cortex	GGCX	0.38	0.17	enet	30	0.02	1.1e-01	4.4	5.3	9.4e-08	0.60	0.32	0.44	FALSE
7	GTEx	Cells EBV-transformed lymphocytes	GGCX	0.36	0.31	enet	18	0.29	4.5e-10	4.2	5.3	9.9e-08	0.71	0.77	0.23	FALSE
1	CommonMind	Brain Pre-frontal Cortex	RNF181	0.07	0.02	bslmm	476	0.03	3.4e-04	5.1	5.3	1.3e-07	0.59	0.05	0.82	FALSE
13	GTEx	Lung	GGCX	0.17	0.17	lasso	2	0.18	2.3e-13	5.2	5.2	1.7e-07	0.72	0.85	0.15	FALSE
24	The Cancer Genome Atlas	Brain Lower Grade Glioma	GGCX	0.05	0.05	lasso	1	0.04	1.2e-05	5.2	5.2	1.9e-07	0.72	0.63	0.23	FALSE
22	NTR	Blood	VAMP5	0.04	0.01	enet	17	0.02	5.1e-08	6.2	-5.2	2.3e-07	-0.33	0.01	0.98	FALSE
29	The Cancer Genome Atlas	Thyroid Carcinoma	GGCX	0.03	0.03	enet	5	0.02	8.7e-03	4.7	5.2	2.5e-07	0.82	0.08	0.35	FALSE