Best TWAS P=1.29e-07 · Best GWAS P=1.77e-08 conditioned to 9.55e-09
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | YFS | Blood | RERE | 0.09 | 0.15 | lasso | 4 | 0.16 | 5.7e-49 | -5.0 | 5.3 | 1.4e-07 | 0.01 | 0.01 | 0.99 | FALSE |
2 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | RERE | 0.22 | 0.04 | lasso | 10 | 0.08 | 4.1e-04 | -4.7 | 5.3 | 1.3e-07 | -0.02 | 0.02 | 0.91 | TRUE |