Best TWAS P=3.1e-10 · Best GWAS P=4.85e-06 conditioned to 0.0554
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Brain Cerebellum | SNX27 | 0.27 | 0.00 | enet | 30 | 0.06 | 0.007 | 4.6 | -5.6 | 2.4e-08 | -0.62 | 0.01 | 0.40 | TRUE |
2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ENSA | 0.02 | 0.01 | enet | 3 | 0.01 | 0.025 | 4.0 | -6.3 | 3.1e-10 | 0.06 | 0.00 | 0.78 | TRUE |