[Hub]/) : Traits : Trunk fat-free mass : ← →

chr12:116,650,803-118,234,710

Best TWAS P=2.67e-13 · Best GWAS P=1.63e-13 conditioned to 1

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	TESC	0.11	0.08	bslmm	556	0.09	1.3e-10	-6.0	5.9	4.7e-09	-0.86	0.37	0.63	FALSE
2	GTEx	Adipose Subcutaneous	TESC	0.09	0.04	lasso	2	0.01	2.1e-02	-5.6	-6.0	2.0e-09	0.87	0.11	0.77	FALSE
3	GTEx	Adipose Subcutaneous	FBXW8	0.12	0.04	lasso	6	0.02	1.2e-02	-6.0	-6.3	3.0e-10	0.81	0.09	0.70	FALSE
4	GTEx	Cells Transformed fibroblasts	FBXW8	0.25	0.24	lasso	4	0.25	5.0e-19	-6.7	6.5	6.3e-11	-0.88	0.39	0.61	FALSE
5	GTEx	Cells Transformed fibroblasts	RP11-231I16.1	0.16	0.18	lasso	2	0.16	2.5e-12	-6.7	6.9	4.1e-12	-0.94	0.11	0.89	FALSE
6	GTEx	Lung	FBXW8	0.15	0.05	lasso	5	0.03	2.5e-03	-5.9	-5.7	1.3e-08	0.84	0.40	0.57	FALSE
7	GTEx	Nerve Tibial	FBXW8	0.17	0.17	lasso	3	0.19	2.5e-13	-6.7	-5.9	3.4e-09	0.78	0.34	0.66	FALSE
8	GTEx	Skin Sun Exposed Lower leg	FBXW8	0.19	0.10	enet	23	0.13	4.2e-11	-6.7	-5.5	3.4e-08	0.87	0.22	0.78	FALSE
9	GTEx	Spleen	FBXW8	0.36	0.16	lasso	2	0.12	5.8e-04	-6.7	-6.6	4.2e-11	0.90	0.05	0.78	FALSE
10	GTEx	Testis	FBXW8	0.27	0.10	lasso	4	0.06	1.9e-03	-6.6	-6.4	1.9e-10	0.83	0.18	0.67	FALSE
11	GTEx	Thyroid	FBXW8	0.14	0.08	lasso	3	0.07	2.3e-06	-6.3	-6.5	6.0e-11	0.93	0.31	0.69	FALSE
12	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	FBXW8	0.14	0.09	lasso	8	0.08	1.8e-07	-6.6	6.6	4.6e-11	-0.90	0.05	0.95	FALSE
13	The Cancer Genome Atlas	Breast Invasive Carcinoma	FBXW8	0.16	0.17	blup	83	0.17	3.9e-34	-6.7	7.0	3.4e-12	-0.88	0.32	0.68	FALSE
14	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	FBXW8	0.09	0.04	blup	81	0.04	3.0e-03	-5.9	6.6	4.1e-11	-0.91	0.02	0.88	FALSE
15	The Cancer Genome Atlas	Colon Adenocarcinoma	FBXW8	0.25	0.18	blup	83	0.20	4.9e-12	-6.7	5.6	1.9e-08	-0.66	0.21	0.79	FALSE
16	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	FBXW8	0.20	0.22	enet	18	0.24	4.5e-26	-6.7	6.2	4.7e-10	-0.81	0.18	0.82	FALSE
17	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	FBXW8	0.12	0.17	enet	12	0.20	1.2e-21	-6.7	6.9	4.5e-12	-0.90	0.47	0.53	FALSE
18	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	FBXW8	0.10	0.10	lasso	7	0.09	7.5e-06	-7.3	7.3	2.7e-13	-0.99	0.01	0.99	TRUE
19	The Cancer Genome Atlas	Brain Lower Grade Glioma	FBXW8	0.17	0.02	blup	83	0.03	7.0e-05	3.6	6.5	1.1e-10	-0.70	0.04	0.70	FALSE
20	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	FBXW8	0.11	0.15	blup	75	0.12	2.4e-06	-5.9	6.3	3.7e-10	-0.94	0.06	0.94	FALSE
21	The Cancer Genome Atlas	Lung Adenocarcinoma	FBXW8	0.10	0.08	enet	15	0.08	1.2e-09	-6.6	7.0	1.8e-12	-0.89	0.10	0.90	FALSE
22	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	FBXW8	0.11	0.12	lasso	6	0.12	3.1e-13	-5.9	6.5	6.0e-11	-0.91	0.13	0.87	FALSE
23	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	FBXW8	0.15	0.11	blup	79	0.13	7.7e-09	-5.9	6.4	2.0e-10	-0.89	0.26	0.74	FALSE
24	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	FBXW8	0.14	0.16	lasso	3	0.17	1.3e-07	-6.0	6.4	2.0e-10	-0.79	0.34	0.52	FALSE
25	The Cancer Genome Atlas	Prostate Adenocarcinoma	FBXW8	0.20	0.29	lasso	9	0.29	1.2e-30	-6.6	6.5	7.2e-11	-0.91	0.39	0.61	FALSE
26	The Cancer Genome Atlas	Rectum Adenocarcinoma	FBXW8	0.13	0.17	lasso	7	0.10	2.0e-03	-6.7	6.7	2.4e-11	-0.91	0.03	0.67	FALSE
27	The Cancer Genome Atlas	Soft Tissue Sarcoma	FBXW8	0.13	0.11	enet	18	0.12	7.0e-08	-6.6	6.2	7.1e-10	-0.78	0.09	0.91	FALSE
28	The Cancer Genome Atlas	Stomach Adenocarcinoma	FBXW8	0.09	0.12	lasso	3	0.12	9.1e-09	-6.0	6.4	1.7e-10	-0.88	0.23	0.77	FALSE
29	The Cancer Genome Atlas	Thyroid Carcinoma	FBXW8	0.22	0.16	blup	83	0.17	2.1e-16	-6.6	6.4	1.4e-10	-0.82	0.40	0.60	FALSE