[Hub]/) : Traits : Trunk fat-free mass : ← →

chr3:183,204,923-186,072,370

Best TWAS P=7.08e-21 · Best GWAS P=9.9e-23 conditioned to 0.00305

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
15	The Cancer Genome Atlas	Lung Adenocarcinoma	PSMD2	0.09	0.02	blup	50	0.05	1.2e-06	-9.1	9.4	7.1e-21	-0.73	0.03	0.84	TRUE
12	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	ETV5	0.03	0.01	blup	55	0.02	1.3e-03	-5.8	-5.7	9.5e-09	-0.04	0.01	0.85	TRUE
11	The Cancer Genome Atlas	Colon Adenocarcinoma	ABCF3	0.07	0.00	blup	51	0.01	4.4e-02	5.5	5.5	4.1e-08	-0.26	0.01	0.87	TRUE
2	CommonMind	Brain Pre-frontal Cortex	SENP2	0.21	0.18	enet	33	0.19	4.2e-22	-5.1	5.5	4.3e-08	0.02	1.00	0.00	TRUE
17	The Cancer Genome Atlas	Testicular Germ Cell Tumors	VWA5B2	0.10	0.04	blup	51	0.04	1.8e-02	5.5	-7.9	2.6e-15	0.43	0.03	0.33	FALSE
1	CommonMind	Brain Pre-frontal Cortex	ECE2	0.24	0.20	bslmm	542	0.19	1.6e-22	7.4	7.3	4.0e-13	-0.37	1.00	0.00	FALSE
6	GTEx	Skin Sun Exposed Lower leg	ABCF3	0.13	0.08	lasso	4	0.11	1.6e-09	5.5	7.0	3.5e-12	-0.36	0.98	0.01	FALSE
13	The Cancer Genome Atlas	Brain Lower Grade Glioma	ECE2	0.04	0.02	blup	61	0.03	3.5e-04	7.4	6.7	2.2e-11	-0.24	0.54	0.02	FALSE
4	GTEx	Brain Putamen basal ganglia	ECE2	0.38	0.03	enet	22	0.11	1.4e-03	7.4	6.3	3.1e-10	-0.28	0.08	0.16	FALSE
5	GTEx	Pituitary	ECE2	0.52	0.30	lasso	7	0.23	1.5e-06	7.4	6.1	1.3e-09	-0.31	0.39	0.23	FALSE
3	GTEx	Artery Tibial	PSMD2	0.13	0.09	lasso	5	0.08	1.3e-06	-5.8	6.0	1.5e-09	-0.42	0.88	0.02	FALSE
7	GTEx	Skin Sun Exposed Lower leg	PSMD2	0.13	0.14	lasso	4	0.15	1.4e-12	-5.8	6.0	2.2e-09	-0.39	1.00	0.00	FALSE
16	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	PSMD2	0.05	0.00	enet	10	0.01	3.6e-02	7.4	5.8	5.7e-09	-0.49	0.01	0.10	FALSE
8	YFS	Blood	PSMD2	0.26	0.22	lasso	5	0.24	2.4e-77	-5.8	5.6	2.7e-08	-0.39	1.00	0.00	FALSE
9	The Cancer Genome Atlas	Breast Invasive Carcinoma	PSMD2	0.03	0.03	blup	50	0.03	4.8e-06	-5.8	5.4	6.6e-08	-0.48	0.66	0.27	FALSE
14	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	ABCF3	0.08	0.03	blup	51	0.06	6.1e-04	2.7	5.4	7.4e-08	-0.25	0.02	0.67	FALSE
10	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	VWA5B2	0.15	0.00	blup	52	0.01	1.4e-01	4.3	5.4	8.0e-08	-0.16	0.01	0.04	FALSE