[Hub]/) : Traits : Trunk fat-free mass : ← →

chr5:76,597,461-78,753,539

Best TWAS P=4.56e-20 · Best GWAS P=4.11e-19 conditioned to 0.035

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
5	The Cancer Genome Atlas	Breast Invasive Carcinoma	AP3B1	0.02	0.00	blup	126	0.01	1.8e-02	-8.93	-9.2	4.6e-20	0.85	0.02	0.89	TRUE
9	The Cancer Genome Atlas	Prostate Adenocarcinoma	AP3B1	0.05	0.02	blup	126	0.03	5.0e-04	6.67	-8.7	4.5e-18	0.81	0.02	0.91	FALSE
6	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	AP3B1	0.16	0.06	enet	18	0.09	2.2e-05	6.68	-7.0	2.3e-12	0.52	0.04	0.53	FALSE
8	The Cancer Genome Atlas	Lung Adenocarcinoma	AP3B1	0.05	0.03	lasso	3	0.04	4.4e-05	6.68	-6.5	1.1e-10	0.38	0.42	0.27	FALSE
7	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	AP3B1	0.08	0.01	enet	20	0.02	9.7e-04	-8.68	-6.4	1.8e-10	0.60	0.02	0.81	FALSE
3	METSIM	Adipose	AP3B1	0.07	0.01	blup	556	0.02	2.4e-04	4.47	-6.2	4.3e-10	0.54	0.10	0.78	FALSE
4	YFS	Blood	AP3B1	0.25	0.22	lasso	9	0.23	2.6e-74	5.97	-6.0	1.7e-09	0.30	1.00	0.00	FALSE
2	GTEx	Testis	LHFPL2	0.18	-0.01	enet	21	0.10	2.1e-05	4.35	5.7	1.0e-08	-0.26	0.11	0.14	FALSE
10	The Cancer Genome Atlas	Thyroid Carcinoma	AP3B1	0.11	0.06	lasso	2	0.05	1.3e-05	5.97	-5.5	3.0e-08	0.20	0.59	0.05	FALSE
1	GTEx	Pituitary	LHFPL2	0.38	0.02	lasso	9	0.04	4.0e-02	0.98	-5.3	1.3e-07	0.50	0.04	0.48	FALSE