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Traits
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Trunk predicted mass
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chr7:17,133,294-18,674,435
Best TWAS P=1.82e-09 · Best GWAS P=2.15e-10 conditioned to 1
17.2M
17.4M
17.6M
17.8M
18M
18.2M
18.4M
18.6M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
5
The Cancer Genome Atlas
Colon Adenocarcinoma
SNX13
0.15
0.16
lasso
3
0.18
1.7e-10
5.9
-6.0
1.8e-09
-0.96
0.02
0.98
TRUE
3
GTEx
Testis
SNX13
0.21
0.14
enet
15
0.13
2.0e-06
-5.7
6.0
2.6e-09
0.80
0.15
0.85
FALSE
2
GTEx
Nerve Tibial
SNX13
0.11
0.09
lasso
3
0.06
4.8e-05
-5.7
5.8
8.8e-09
0.74
0.20
0.79
FALSE
4
METSIM
Adipose
SNX13
0.07
0.09
lasso
2
0.09
1.0e-13
5.1
5.6
1.7e-08
0.68
0.36
0.64
FALSE
1
GTEx
Adipose Subcutaneous
SNX13
0.19
0.16
lasso
2
0.13
1.5e-10
5.1
5.6
2.6e-08
0.64
0.59
0.41
FALSE