TWAS
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Genes
Traits
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Traits
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Trunk predicted mass
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chr7:22,946,782-24,382,726
Best TWAS P=2.67e-20 · Best GWAS P=1.83e-23 conditioned to 0.000662
23M
23.2M
23.4M
23.6M
23.8M
24M
24.2M
24.4M
0
5
10
15
20
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Esophageal Carcinoma
TRA2A
0.18
0.02
blup
40
0.05
0.012
-9.7
-9.2
2.7e-20
0.64
0.00
0.60
TRUE
3
The Cancer Genome Atlas
Soft Tissue Sarcoma
RPS2P32
0.08
0.02
blup
27
0.02
0.031
-6.4
7.1
1.1e-12
-0.70
0.02
0.42
TRUE
1
GTEx
Esophagus Mucosa
CCDC126
0.12
0.03
lasso
7
0.01
0.043
-7.9
7.3
3.8e-13
-0.66
0.05
0.77
FALSE