[Hub]/) : Traits : Trunk predicted mass :

chr11:17,923,676-19,345,331

Best TWAS P=1.79e-11 · Best GWAS P=3.7e-10 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous SPTY2D1 0.18 0.14 lasso 5 0.14 6.7e-12 -6.0 5.9 4.1e-09 0.54 0.02 0.98 FALSE
2 GTEx Artery Aorta SPTY2D1 0.13 0.17 enet 10 0.16 2.5e-09 6.3 6.7 1.8e-11 0.97 0.00 1.00 TRUE
3 GTEx Cells Transformed fibroblasts SPTY2D1 0.31 0.27 lasso 6 0.26 2.5e-19 6.2 6.0 1.5e-09 1.00 0.00 1.00 FALSE
4 GTEx Cells Transformed fibroblasts SPTY2D1-AS1 0.14 0.12 lasso 6 0.11 9.0e-09 6.2 5.7 1.0e-08 0.99 0.00 1.00 FALSE
5 The Cancer Genome Atlas Lung Adenocarcinoma SPTY2D1 0.06 0.07 lasso 2 0.06 1.5e-07 6.3 6.2 4.7e-10 1.00 0.00 1.00 FALSE
6 The Cancer Genome Atlas Lung Squamous Cell Carcinoma SPTY2D1 0.03 0.00 blup 43 0.01 2.0e-02 6.3 6.2 7.4e-10 0.93 0.00 0.99 FALSE
7 The Cancer Genome Atlas Prostate Adenocarcinoma SPTY2D1 0.14 0.20 lasso 3 0.20 4.4e-21 6.3 6.2 5.1e-10 1.00 0.00 1.00 FALSE
8 The Cancer Genome Atlas Thyroid Carcinoma SPTY2D1 0.10 0.09 lasso 3 0.09 3.2e-09 6.2 6.0 1.7e-09 1.00 0.01 0.99 FALSE