[Hub]/) : Traits : Trunk predicted mass : ← →

chr16:71,070,698-72,569,466

Best TWAS P=2.2e-09 · Best GWAS P=5.1e-11 conditioned to 3.66e-07

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex PHLPP2 0.04 0.01 bslmm 456 0.02 4.7e-04 -4.8 -5.8 8.0e-09 0.57 0.09 0.90 FALSE
2 GTEx Adrenal Gland AP1G1 0.22 0.06 enet 25 0.14 8.0e-06 -6.1 -5.8 5.1e-09 0.58 0.05 0.94 FALSE
3 GTEx Artery Aorta AP1G1 0.10 0.09 lasso 2 0.07 1.3e-04 -5.1 -5.1 2.8e-07 0.66 0.11 0.80 FALSE
4 GTEx Skin Sun Exposed Lower leg AP1G1 0.06 0.00 enet 15 0.01 5.7e-02 -5.4 -5.2 1.6e-07 0.54 0.10 0.78 FALSE
5 GTEx Testis PHLPP2 0.29 0.38 enet 20 0.37 3.0e-17 -6.2 5.9 2.8e-09 -0.64 0.04 0.96 FALSE
6 METSIM Adipose PHLPP2 0.07 0.03 lasso 5 0.06 1.7e-09 4.2 5.6 1.9e-08 -0.46 1.00 0.00 FALSE
7 YFS Blood ATXN1L 0.02 0.02 blup 413 0.02 6.5e-07 3.9 5.6 2.8e-08 -0.45 0.96 0.03 FALSE
8 YFS Blood PHLPP2 0.04 0.03 bslmm 459 0.05 5.5e-16 -6.0 6.0 2.6e-09 -0.52 0.07 0.93 FALSE
9 The Cancer Genome Atlas Esophageal Carcinoma PHLPP2 0.18 0.03 blup 67 0.07 2.9e-03 -6.2 -5.3 8.7e-08 0.56 0.02 0.74 FALSE
10 The Cancer Genome Atlas Brain Lower Grade Glioma AP1G1 0.03 0.03 lasso 4 0.02 2.1e-03 -4.0 -5.4 7.7e-08 0.62 0.02 0.86 FALSE
11 The Cancer Genome Atlas Prostate Adenocarcinoma AP1G1 0.11 0.02 enet 27 0.04 1.2e-04 4.2 -6.0 2.2e-09 0.28 0.08 0.24 TRUE
12 The Cancer Genome Atlas Testicular Germ Cell Tumors PHLPP2 0.11 0.03 lasso 6 0.01 1.2e-01 4.1 5.7 1.6e-08 -0.43 0.03 0.46 FALSE
13 The Cancer Genome Atlas Thyroid Carcinoma MARVELD3 0.08 0.01 blup 44 0.06 7.1e-07 -6.1 5.8 7.7e-09 -0.49 0.02 0.96 FALSE