[Hub]/) : Traits : Trunk predicted mass : ← →

chr2:197,560,575-201,571,143

Best TWAS P=2.06e-11 · Best GWAS P=8.25e-13 conditioned to 0.000278

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
11	GTEx	Skin Sun Exposed Lower leg	MARS2	0.04	0.05	enet	8	0.03	1.2e-03	-6.8	6.7	2.1e-11	-0.86	0.07	0.92	TRUE
5	GTEx	Brain Hippocampus	FTCDNL1	0.35	0.24	enet	24	0.26	9.0e-07	-4.4	-6.5	5.7e-11	-0.10	0.22	0.43	TRUE
6	GTEx	Brain Nucleus accumbens basal ganglia	C2orf47	0.25	0.01	lasso	3	0.00	2.8e-01	5.2	-5.7	1.0e-08	0.04	0.04	0.53	TRUE
9	GTEx	Lung	RFTN2	0.06	0.08	lasso	8	0.06	2.7e-05	-6.7	-6.7	3.0e-11	0.86	0.07	0.93	FALSE
12	GTEx	Spleen	RFTN2	0.11	0.03	enet	26	0.05	2.4e-02	-6.7	-6.6	4.1e-11	0.84	0.07	0.51	FALSE
16	GTEx	Thyroid	PLCL1	0.04	0.01	lasso	4	0.00	2.6e-01	-6.6	-6.6	4.7e-11	0.76	0.16	0.59	FALSE
13	GTEx	Spleen	MARS2	0.12	0.04	lasso	5	0.00	3.4e-01	-6.7	6.4	1.4e-10	-0.82	0.06	0.42	FALSE
18	GTEx	Whole Blood	PLCL1	0.08	0.08	enet	15	0.05	4.1e-05	-6.1	-6.4	1.7e-10	0.92	0.16	0.84	FALSE
24	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	RFTN2	0.05	0.01	blup	61	0.02	3.1e-02	-5.2	-6.4	1.7e-10	0.70	0.04	0.40	FALSE
15	GTEx	Thyroid	SF3B1	0.04	0.02	enet	14	0.02	2.0e-02	-5.1	-6.3	3.8e-10	0.72	0.09	0.84	FALSE
7	GTEx	Breast Mammary Tissue	SF3B1	0.06	0.06	lasso	4	0.03	6.6e-03	-5.2	-6.0	2.2e-09	0.61	0.17	0.67	FALSE
8	GTEx	Breast Mammary Tissue (Female)	SF3B1	0.05	-0.01	lasso	3	-0.01	8.1e-01	-5.1	-5.8	7.7e-09	0.65	0.05	0.10	FALSE
3	GTEx	Adipose Subcutaneous	RFTN2	0.14	0.10	enet	11	0.13	5.3e-11	-6.2	-5.7	1.6e-08	0.86	0.19	0.81	FALSE
20	YFS	Blood	PLCL1	0.10	0.10	lasso	9	0.14	1.5e-43	-6.3	-5.5	3.6e-08	0.83	0.54	0.46	FALSE
22	The Cancer Genome Atlas	Lung Adenocarcinoma	C2orf60	0.03	0.03	blup	44	0.03	1.8e-04	-5.2	5.5	4.7e-08	-0.05	0.01	0.97	FALSE
17	GTEx	Thyroid	RFTN2	0.04	0.01	enet	11	0.01	9.5e-02	-6.7	-5.5	5.0e-08	0.80	0.07	0.79	FALSE
19	ROSMAP	Brain Pre-frontal Cortex	TYW5	0.11	0.12	lasso	5	0.11	5.5e-14	-5.2	5.5	5.1e-08	-0.04	0.03	0.97	FALSE
2	CommonMind	Brain Pre-frontal Cortex	TYW5	0.08	0.14	lasso	8	0.13	2.2e-15	-5.2	5.4	6.9e-08	-0.05	0.03	0.97	FALSE
23	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	C2orf60	0.04	0.05	lasso	5	0.03	2.1e-03	-5.3	5.3	1.3e-07	-0.04	0.01	0.91	FALSE
4	GTEx	Brain Caudate basal ganglia	TYW5	0.23	0.11	lasso	3	0.11	5.4e-04	-4.3	5.2	1.7e-07	-0.03	0.05	0.45	FALSE
1	CommonMind	Brain Pre-frontal Cortex	SF3B1	0.06	0.07	enet	10	0.07	2.5e-09	-5.1	-5.2	2.2e-07	0.49	1.00	0.00	FALSE
14	GTEx	Testis	SF3B1	0.10	0.07	enet	17	0.08	2.6e-04	-5.1	-5.2	2.2e-07	0.55	0.45	0.50	FALSE
10	GTEx	Nerve Tibial	SF3B1	0.06	0.09	lasso	8	0.08	3.3e-06	-5.1	-5.2	2.5e-07	0.54	0.96	0.04	FALSE
21	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	PLCL1	0.04	0.00	blup	130	0.02	4.0e-03	1.8	-5.2	2.7e-07	0.65	0.05	0.40	FALSE