Best TWAS P=1.24e-09 · Best GWAS P=1.12e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | S100A16 | 0.13 | 0.11 | lasso | 4 | 0.1 | 5.0e-06 | 6.1 | 6.1 | 1.2e-09 | 1.00 | 0.01 | 0.99 | TRUE |
2 | YFS | Blood | CRTC2 | 0.01 | 0.00 | blup | 301 | 0.0 | 7.6e-02 | -4.2 | 5.2 | 1.8e-07 | 0.15 | 0.03 | 0.83 | TRUE |