TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Taking other prescription medications
:
←
→
chr17:47,119,135-47,685,050
Best TWAS P=3.01e-09 · Best GWAS P=1.23e-08 conditioned to 0.296
47.1M
47.2M
47.3M
47.4M
47.5M
47.6M
47.7M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Lung Adenocarcinoma
ZNF652
0.05
0.02
blup
55
0.02
0.00249
5.4
-5.9
3.0e-09
-0.88
0.01
0.96
TRUE
1
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
ZNF652
0.03
0.03
enet
5
0.03
0.00026
5.5
-5.6
1.9e-08
-0.90
0.01
0.97
FALSE
2
The Cancer Genome Atlas
Brain Lower Grade Glioma
ZNF652
0.06
0.03
lasso
4
0.02
0.00165
5.7
-5.4
6.1e-08
-0.96
0.01
0.98
FALSE