Best TWAS P=8.61e-08 · Best GWAS P=1.52e-07 conditioned to 0.0786
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | METSIM | Adipose | EDNRB | 0.05 | 0.03 | bslmm | 465 | 0.04 | 3.1e-06 | -5.2 | 5.3 | 9.2e-08 | -0.78 | 0.02 | 0.98 | FALSE |
2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | EDNRB | 0.02 | 0.00 | blup | 60 | 0.00 | 3.1e-02 | -5.1 | 5.4 | 8.6e-08 | -0.77 | 0.01 | 0.45 | TRUE |