Best TWAS P=1.31e-07 · Best GWAS P=1.07e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adrenal Gland | FHL3 | 0.24 | 0.15 | enet | 17 | 0.34 | 7.4e-13 | 3.7 | 5.2 | 2.0e-07 | -0.79 | 0.01 | 0.98 | FALSE |
2 | YFS | Blood | UTP11L | 0.09 | 0.05 | lasso | 6 | 0.07 | 8.6e-21 | -5.3 | 5.1 | 2.8e-07 | -0.83 | 0.00 | 1.00 | FALSE |
3 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FHL3 | 0.08 | 0.08 | lasso | 2 | 0.08 | 1.4e-09 | -5.3 | 5.3 | 1.3e-07 | -0.97 | 0.00 | 1.00 | TRUE |
4 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FHL3 | 0.10 | 0.05 | lasso | 2 | 0.03 | 2.2e-03 | -5.3 | 5.2 | 2.0e-07 | -0.98 | 0.00 | 0.93 | FALSE |