Best TWAS P=9.79e-10 · Best GWAS P=2.81e-10 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Nerve Tibial | DLEU2 | 0.11 | 0.05 | lasso | 3 | 0.02 | 0.0078 | 6.1 | 6.1 | 9.8e-10 | 0.98 | 0.01 | 0.98 | TRUE |
2 | The Cancer Genome Atlas | Thyroid Carcinoma | TRIM13 | 0.04 | 0.00 | blup | 26 | 0.02 | 0.0085 | 6.1 | -5.2 | 2.3e-07 | -0.65 | 0.00 | 0.45 | FALSE |