Best TWAS P=5.45e-08 · Best GWAS P=1.19e-06 conditioned to 0.0466
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Lung | MED19 | 0.12 | 0.00 | enet | 12 | 0.06 | 2.9e-05 | 3.6 | 5.4 | 5.4e-08 | 0.6 | 0.04 | 0.74 | TRUE |
2 | GTEx | Thyroid | MED19 | 0.11 | 0.02 | lasso | 12 | 0.07 | 3.2e-06 | -3.0 | 5.3 | 9.9e-08 | 0.6 | 0.13 | 0.44 | FALSE |