Best TWAS P=2.9e-12 · Best GWAS P=1.91e-25 conditioned to 3.34e-15
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | PKDCC | 0.19 | 0.02 | blup | 559 | 0.06 | 2.1e-07 | 9.95 | 7.0 | 2.9e-12 | 0.55 | 0.02 | 0.98 | TRUE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | PKDCC | 0.05 | 0.01 | blup | 80 | 0.04 | 2.6e-03 | -0.22 | 5.8 | 9.1e-09 | 0.78 | 0.02 | 0.55 | FALSE |