Best TWAS P=5.31e-09 · Best GWAS P=1.38e-06 conditioned to 0.00435
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Brain Putamen basal ganglia | EBPL | 0.31 | -0.01 | enet | 18 | 0.05 | 2.9e-02 | -3.7 | 5.8 | 5.3e-09 | -0.37 | 0.02 | 0.27 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | EBPL | 0.27 | 0.16 | blup | 59 | 0.22 | 1.0e-12 | 3.5 | 5.4 | 5.9e-08 | -0.24 | 0.01 | 0.50 | FALSE |