Best TWAS P=7.34e-08 · Best GWAS P=4.61e-10 conditioned to 0.000452
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Stomach | TFB1M | 0.19 | 0.09 | enet | 14 | 0.09 | 2.8e-05 | -4.3 | -5.3 | 1.3e-07 | -0.57 | 0.11 | 0.88 | FALSE |
| 2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TFB1M | 0.05 | 0.03 | blup | 96 | 0.02 | 7.9e-04 | -4.5 | -5.3 | 1.4e-07 | -0.54 | 0.39 | 0.48 | FALSE |
| 3 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | TFB1M | 0.18 | 0.18 | blup | 96 | 0.19 | 4.0e-13 | -4.0 | -5.4 | 7.3e-08 | -0.68 | 0.91 | 0.08 | TRUE |
| 4 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TFB1M | 0.21 | 0.23 | enet | 11 | 0.26 | 1.8e-26 | -4.0 | -5.2 | 1.6e-07 | -0.58 | 0.98 | 0.01 | FALSE |