Best TWAS P=3.46e-09 · Best GWAS P=9.64e-09 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | CDK6 | 0.12 | 0.1 | lasso | 2 | 0.10 | 1.9e-12 | 5.4 | 5.3 | 8.7e-08 | 0.89 | 0.02 | 0.98 | FALSE |
| 2 | GTEx | Testis | CDK6 | 0.10 | 0.1 | lasso | 3 | 0.09 | 8.0e-05 | 5.7 | -5.9 | 3.5e-09 | -0.96 | 0.01 | 0.99 | TRUE |