TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Hip circumference
:
←
→
chr13:27,300,215-28,717,392
Best TWAS P=2.62e-11 · Best GWAS P=4.36e-12 conditioned to 0.0976
27.4M
27.6M
27.8M
28M
28.2M
28.4M
28.6M
28.8M
0
2
4
6
8
10
12
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Nerve Tibial
AL137059.1
0.10
0.02
lasso
3
0.03
2.9e-03
5.0
-6.7
2.6e-11
0.71
0.02
0.94
TRUE
5
The Cancer Genome Atlas
Brain Lower Grade Glioma
GTF3A
0.03
0.00
enet
8
0.01
2.3e-02
2.0
6.0
2.1e-09
-0.63
0.01
0.84
TRUE
3
GTEx
Testis
MTIF3
0.45
0.28
lasso
11
0.25
1.8e-11
5.0
-5.7
1.3e-08
0.49
0.96
0.04
FALSE
4
YFS
Blood
GTF3A
0.17
0.15
lasso
5
0.19
1.1e-58
3.8
-5.6
1.9e-08
0.44
1.00
0.00
FALSE
1
GTEx
Muscle Skeletal
MTIF3
0.12
0.03
lasso
5
0.03
1.2e-03
-4.8
-5.5
3.0e-08
0.74
0.20
0.68
FALSE