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chr14:59,862,624-61,664,530
Best TWAS P=3.75e-08 · Best GWAS P=1.79e-14 conditioned to 2.57e-05
60M
60.5M
61M
61.5M
0
5
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Lung Adenocarcinoma
C14orf39
0.02
0.02
blup
37
0.02
4.2e-03
3.4
-5.5
3.7e-08
-0.54
0.08
0.30
TRUE
2
GTEx
Skin Not Sun Exposed Suprapubic
PCNXL4
0.15
0.05
enet
15
0.12
6.2e-07
1.6
-5.5
4.4e-08
-0.59
0.27
0.68
TRUE
4
The Cancer Genome Atlas
Pheochromocytoma and Paraganglioma
C14orf39
0.08
0.05
blup
37
0.05
4.2e-03
4.0
-5.3
1.1e-07
-0.52
0.07
0.50
FALSE
1
GTEx
Muscle Skeletal
C14orf39
0.06
0.05
lasso
3
0.05
2.7e-05
3.5
-5.3
1.4e-07
-0.59
0.31
0.66
FALSE
5
The Cancer Genome Atlas
Prostate Adenocarcinoma
C14orf39
0.08
0.09
blup
37
0.11
1.8e-11
4.1
-5.1
3.1e-07
-0.50
1.00
0.00
FALSE