Best TWAS P=8.21e-10 · Best GWAS P=3.1e-13 conditioned to 5.84e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | PTEN | 0.07 | 0.00 | blup | 450 | 0.01 | 6.0e-02 | -4.0 | 5.5 | 4.2e-08 | 0.55 | 0.01 | 0.95 | TRUE |
| 2 | GTEx | Heart Left Ventricle | BMPR1A | 0.12 | -0.01 | enet | 37 | 0.01 | 7.3e-02 | 3.5 | 6.1 | 8.2e-10 | 0.05 | 0.03 | 0.21 | TRUE |
| 3 | GTEx | Skin Sun Exposed Lower leg | SNCG | 0.09 | 0.01 | enet | 9 | 0.05 | 6.3e-05 | 5.4 | 5.2 | 2.6e-07 | 0.04 | 0.00 | 1.00 | TRUE |