TWAS
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Usage
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Genes
Traits
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Traits
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Standing height
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chr5:9,999,146-11,452,037
Best TWAS P=8.59e-08 · Best GWAS P=2.85e-07 conditioned to 0.148
10M
10.2M
10.4M
10.6M
10.8M
11M
11.2M
11.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
METSIM
Adipose
DAP
0.13
0.03
bslmm
662
0.06
1.7e-09
-5.1
-5.4
8.6e-08
0.79
0.00
1.00
TRUE
1
GTEx
Adipose Visceral Omentum
DAP
0.21
0.07
enet
26
0.09
1.4e-05
2.3
-5.2
2.3e-07
0.59
0.04
0.86
FALSE
3
YFS
Blood
DAP
0.35
0.19
lasso
8
0.27
1.3e-88
-5.1
-5.1
3.0e-07
0.84
0.00
1.00
FALSE