TWAS
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Genes
Traits
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Traits
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Standing height
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chr5:107,366,256-109,224,099
Best TWAS P=2.08e-16 · Best GWAS P=2.35e-26 conditioned to 5.2e-05
107.5M
108M
108.5M
109M
0
5
10
15
20
25
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Artery Aorta
FER
0.23
0.15
enet
7
0.18
3.3e-10
8.0
8.2
2.1e-16
0.55
0.58
0.41
TRUE
3
GTEx
Artery Tibial
FER
0.14
0.06
enet
7
0.05
7.3e-05
-5.8
7.8
9.0e-15
0.67
0.25
0.74
TRUE
4
GTEx
Lung
LINC01023
0.11
0.02
enet
16
0.01
9.3e-02
-4.0
-7.0
2.1e-12
-0.44
0.09
0.25
TRUE
2
GTEx
Artery Coronary
FER
0.34
0.10
lasso
8
0.12
5.4e-05
-5.8
7.1
1.2e-12
0.58
0.16
0.29
FALSE