TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Standing height
:
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chr5:111,499,732-112,928,865
Best TWAS P=1.39e-07 · Best GWAS P=2.29e-09 conditioned to 0.000875
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Cells Transformed fibroblasts
CTC-487M23.5
0.07
0.03
lasso
3
0.03
0.0029
-4.7
-5.3
1.4e-07
0.66
0.05
0.83
TRUE
3
The Cancer Genome Atlas
Thyroid Carcinoma
APC
0.02
0.02
enet
5
0.02
0.0042
-5.0
5.2
1.7e-07
-0.74
0.02
0.88
FALSE
2
YFS
Blood
SRP19
0.02
0.01
bslmm
456
0.00
0.0287
4.6
5.2
2.4e-07
-0.67
0.03
0.82
FALSE