Best TWAS P=1.14e-13 · Best GWAS P=1.29e-11 conditioned to 0.000982
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | NR3C1 | 0.16 | 0.00 | lasso | 4 | 0.03 | 0.0073 | -5.2 | -7.4 | 1.1e-13 | 0.65 | 0.05 | 0.23 | TRUE |
2 | GTEx | Liver | YIPF5 | 0.24 | -0.01 | enet | 9 | 0.01 | 0.1880 | 6.5 | -5.9 | 3.3e-09 | -0.09 | 0.01 | 0.90 | TRUE |