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chr4:151,637,154-153,373,680
Best TWAS P=2.22e-09 · Best GWAS P=2.85e-11 conditioned to 2.51e-06
151.6M
151.8M
152M
152.2M
152.4M
152.6M
152.8M
153M
153.2M
153.4M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
FAM160A1
0.04
0.04
blup
436
0.06
1.8e-07
-5.6
6.0
2.2e-09
-0.39
0.44
0.56
TRUE
6
ROSMAP
Brain Pre-frontal Cortex
PET112
0.04
0.02
bslmm
410
0.04
5.2e-06
-5.7
5.9
4.8e-09
-0.35
0.36
0.56
FALSE
3
GTEx
Cells EBV-transformed lymphocytes
PET112
0.26
0.20
enet
23
0.26
3.7e-09
-5.7
-5.5
3.8e-08
0.27
0.37
0.62
FALSE
2
GTEx
Brain Frontal Cortex BA9
PET112
0.22
0.13
enet
14
0.05
1.6e-02
-5.6
5.4
5.3e-08
-0.26
0.19
0.22
FALSE
5
GTEx
Nerve Tibial
PET112
0.13
0.10
enet
13
0.10
9.7e-08
-5.0
5.4
7.8e-08
-0.20
0.51
0.49
FALSE
4
GTEx
Heart Left Ventricle
PET112
0.14
0.06
lasso
4
0.04
5.0e-03
-5.6
5.3
9.0e-08
-0.15
0.22
0.29
FALSE