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chr7:70,354,372-72,313,144
Best TWAS P=1.47e-10 · Best GWAS P=1.93e-10 conditioned to 0.0472
70.5M
71M
71.5M
72M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
CALN1
0.05
0.02
lasso
4
0.01
1.0e-02
-6.2
6.4
1.5e-10
-0.93
0.02
0.98
TRUE
3
The Cancer Genome Atlas
Lung Squamous Cell Carcinoma
WBSCR17
0.08
0.01
blup
313
0.04
1.7e-05
2.1
-5.7
1.0e-08
-0.06
0.02
0.02
TRUE
2
ROSMAP
Brain Pre-frontal Cortex
CALN1
0.11
0.08
bslmm
475
0.07
9.5e-10
-4.9
5.2
1.7e-07
-0.71
0.52
0.48
FALSE