Best TWAS P=2.01e-07 · Best GWAS P=1.05e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C9orf5 | 0.04 | 0.01 | lasso | 2 | 0.02 | 0.0017 | 5.3 | 5.2 | 2e-07 | 0.98 | 0 | 0.98 | TRUE |