TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
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chr3:84,767,271-86,367,480
Best TWAS P=6.57e-08 · Best GWAS P=5.34e-06 conditioned to 0.0483
84.8M
85M
85.2M
85.4M
85.6M
85.8M
86M
86.2M
86.4M
0
1
2
3
4
5
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Thyroid Carcinoma
CADM2
0.05
0
blup
339
0.02
0.0032
-3.7
-5.4
6.6e-08
-0.53
0.02
0.08
TRUE
1
The Cancer Genome Atlas
Brain Lower Grade Glioma
CADM2
0.06
0
blup
339
0.00
0.2680
3.0
5.4
6.9e-08
0.69
0.01
0.17
FALSE