TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
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chr5:59,353,199-60,833,080
Best TWAS P=2.82e-09 · Best GWAS P=4.8e-11 conditioned to 9.67e-05
59.4M
59.6M
59.8M
60M
60.2M
60.4M
60.6M
60.8M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Skin Not Sun Exposed Suprapubic
ELOVL7
0.14
0.09
lasso
3
0.08
6.3e-05
-5.1
5.9
2.8e-09
-0.57
0.22
0.18
TRUE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
ERCC8
0.06
0.04
lasso
1
0.02
2.3e-03
-5.2
-5.2
2.1e-07
0.62
0.00
0.98
FALSE
2
The Cancer Genome Atlas
Lung Adenocarcinoma
ERCC8
0.04
0.01
blup
39
0.01
8.1e-03
-2.8
-5.1
2.9e-07
0.67
0.00
0.65
FALSE