Best TWAS P=9.81e-10 · Best GWAS P=1.97e-10 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | FEM1A | 0.1 | 0.10 | lasso | 3 | 0.08 | 0.00046 | -6.4 | -6.1 | 9.8e-10 | 0.97 | 0.00 | 0.97 | TRUE |
2 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | FEM1A | 0.1 | 0.07 | lasso | 4 | 0.06 | 0.00298 | -5.3 | -5.4 | 6.1e-08 | 0.63 | 0.01 | 0.74 | FALSE |