[Hub]/) : Traits : Mouth/teeth dental problems: Mouth ulcers :

chr19:46,157,004-47,589,895

Best TWAS P=6.21e-22 · Best GWAS P=4.43e-20 conditioned to 0.0108

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous PPP5C 0.13 0.06 enet 8 0.10 1.2e-08 7.2 -7.1 8.9e-13 0.39 0.99 0.00 FALSE
2 GTEx Adipose Visceral Omentum PPP5C 0.19 0.04 enet 17 0.05 1.0e-03 7.9 -5.5 5.0e-08 0.38 0.12 0.38 FALSE
3 GTEx Spleen PPP5C 0.33 0.44 lasso 1 0.43 1.8e-12 7.9 -7.9 3.0e-15 0.61 0.48 0.50 FALSE
4 GTEx Spleen AC007193.9 0.49 0.07 lasso 5 0.20 7.8e-06 7.9 -9.6 6.2e-22 0.79 0.01 0.94 TRUE
5 GTEx Whole Blood PPP5C 0.16 0.12 enet 18 0.12 3.0e-11 7.2 -8.1 3.6e-16 0.72 0.22 0.78 FALSE
6 METSIM Adipose PPP5C 0.23 0.18 lasso 8 0.18 3.8e-26 7.9 -8.0 1.1e-15 0.63 0.98 0.02 FALSE
7 The Cancer Genome Atlas Thyroid Carcinoma CCDC8 0.11 0.02 blup 46 0.07 1.7e-07 4.4 -6.3 3.5e-10 0.43 0.00 0.98 FALSE
8 The Cancer Genome Atlas Thyroid Carcinoma PPP5C 0.06 0.03 enet 10 0.01 1.4e-02 7.9 -8.6 5.2e-18 0.57 0.00 0.95 FALSE