TWAS
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Mouth/teeth dental problems
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chr1:243,298,257-243,910,067
Best TWAS P=1.08e-09 · Best GWAS P=1.13e-06 conditioned to 0.538
243.3M
243.4M
243.5M
243.6M
243.7M
243.8M
243.9M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Brain Lower Grade Glioma
SDCCAG8
0.11
0.04
blup
114
0.06
1.1e-07
4.5
-6.1
1.1e-09
-0.73
0.02
0.94
TRUE
3
The Cancer Genome Atlas
Rectum Adenocarcinoma
SDCCAG8
0.30
0.06
blup
113
0.12
8.0e-04
-4.3
-5.3
1.2e-07
-0.61
0.02
0.53
FALSE
1
The Cancer Genome Atlas
Breast Invasive Carcinoma
SDCCAG8
0.06
0.04
blup
115
0.04
2.0e-08
4.3
-5.2
1.5e-07
-0.84
0.01
0.97
FALSE