TWAS
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Traits
[Hub]/) :
Traits
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Vascular/heart problems diagnosed by doctor
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chr12:109,591,369-111,015,121
Best TWAS P=8.02e-08 · Best GWAS P=1.32e-06 conditioned to 0.232
109.6M
109.8M
110M
110.2M
110.4M
110.6M
110.8M
111M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Thyroid Carcinoma
TCHP
0.05
0.01
blup
56
0.03
0.0014
-4.4
5.4
8.0e-08
0.76
0.02
0.50
TRUE
1
GTEx
Breast Mammary Tissue (Female)
GLTP
0.14
0.06
lasso
6
0.06
0.0077
4.8
5.2
1.5e-07
0.83
0.02
0.64
FALSE