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chr12:47,737,273-49,444,545
Best TWAS P=6.3e-09 · Best GWAS P=1.33e-09 conditioned to 0.246
47.8M
48M
48.2M
48.4M
48.6M
48.8M
49M
49.2M
49.4M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
HDAC7
0.05
0.02
blup
85
0.01
7.5e-03
-5.8
-5.8
6.3e-09
0.82
0.00
0.97
TRUE
1
CommonMind
Brain Pre-frontal Cortex
SENP1
0.05
0.02
blup
555
0.04
1.7e-05
5.4
-5.5
4.2e-08
0.12
0.23
0.77
TRUE
5
The Cancer Genome Atlas
Thyroid Carcinoma
ZNF641
0.11
0.12
enet
10
0.12
5.2e-12
5.2
5.5
4.4e-08
-0.08
0.00
1.00
FALSE
3
GTEx
Nerve Tibial
ZNF641
0.14
0.11
lasso
4
0.08
2.3e-06
5.1
5.3
1.2e-07
-0.07
0.02
0.98
FALSE
2
GTEx
Lung
ZNF641
0.08
0.10
lasso
2
0.08
8.0e-07
5.3
5.2
1.6e-07
-0.07
0.01
0.98
FALSE