TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
High blood pressure
:
←
→
chr12:66,965,631-68,410,906
Best TWAS P=3.4e-08 · Best GWAS P=3.45e-08 conditioned to 1
67M
67.2M
67.4M
67.6M
67.8M
68M
68.2M
68.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
CAND1
0.07
0.05
lasso
4
0.06
2.3e-07
5.4
-5.5
3.4e-08
-0.97
0.01
0.99
TRUE
2
GTEx
Adipose Subcutaneous
CAND1
0.11
0.06
lasso
6
0.05
6.4e-05
5.5
-5.5
4.1e-08
-0.95
0.02
0.98
FALSE
3
GTEx
Artery Tibial
CAND1
0.07
0.03
lasso
3
0.03
1.7e-03
5.4
-5.3
1.4e-07
-0.96
0.03
0.96
FALSE
4
GTEx
Lung
CAND1
0.11
0.00
lasso
5
0.00
2.1e-01
5.0
-5.2
2.5e-07
-0.89
0.02
0.94
FALSE