TWAS
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Models
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Traits
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Traits
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High blood pressure
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chr16:69,337,091-70,978,362
Best TWAS P=1.42e-07 · Best GWAS P=4.98e-07 conditioned to 0.373
69.4M
69.6M
69.8M
70M
70.2M
70.4M
70.6M
70.8M
71M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Esophagus Gastroesophageal Junction
RP11-296I10.6
0.26
0.22
enet
15
0.20
7.9e-08
-4.2
-5.3
1.4e-07
-0.87
0.05
0.88
TRUE
2
GTEx
Colon Sigmoid
PDXDC2P
0.30
0.16
enet
13
0.14
8.8e-06
4.2
-5.3
1.4e-07
-0.82
0.04
0.88
FALSE
1
GTEx
Brain Cerebellum
PDPR
0.23
0.06
enet
20
0.11
3.7e-04
-4.1
-5.2
1.9e-07
-0.58
0.03
0.30
FALSE
5
GTEx
Thyroid
PDXDC2P
0.41
0.27
lasso
10
0.30
5.0e-23
4.5
-5.2
1.9e-07
-0.87
0.03
0.93
FALSE
4
GTEx
Stomach
RP11-296I10.6
0.24
0.15
enet
14
0.16
4.5e-08
-4.2
-5.2
2.2e-07
-0.70
0.09
0.80
FALSE