Best TWAS P=1.72e-08 · Best GWAS P=3.38e-11 conditioned to 3.48e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Visceral Omentum | NLRX1 | 0.14 | 0.03 | lasso | 5 | 0.03 | 0.0096 | -4.7 | 5.6 | 1.7e-08 | 0.32 | 0.16 | 0.04 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | DDX6 | 0.05 | 0.03 | blup | 14 | 0.03 | 0.0012 | 5.4 | -5.3 | 1.2e-07 | -0.78 | 0.00 | 0.96 | FALSE |