Best TWAS P=1.08e-13 · Best GWAS P=1.76e-12 conditioned to 0.00743
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | UBAC2 | 0.09 | 0.06 | lasso | 3 | 0.04 | 1.5e-05 | 5.7 | -5.7 | 1.1e-08 | -0.59 | 0.83 | 0.17 | TRUE |
2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | UBAC2 | 0.05 | 0.00 | blup | 118 | 0.02 | 2.8e-04 | 2.3 | 7.4 | 1.1e-13 | 0.49 | 0.12 | 0.31 | TRUE |