[Hub]/) : Traits : Allergy :

chr1:151,313,774-152,712,747

Best TWAS P=5.51e-21 · Best GWAS P=4.34e-19 conditioned to 0.857

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Colon Sigmoid S100A11 0.18 0.13 lasso 3 0.14 1.1e-05 -5.27 -5.4 8.2e-08 -0.08 0.22 0.04 TRUE
2 The Cancer Genome Atlas Breast Invasive Carcinoma LINGO4 0.15 0.03 lasso 4 0.05 8.9e-10 -6.79 -6.3 2.6e-10 0.02 0.96 0.00 TRUE
3 The Cancer Genome Atlas Colon Adenocarcinoma LINGO4 0.29 0.07 enet 15 0.07 8.3e-05 -6.79 -9.4 5.5e-21 -0.28 0.06 0.12 TRUE
4 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma LINGO4 0.24 0.07 lasso 4 0.11 1.7e-12 -6.79 -6.1 1.4e-09 0.03 0.98 0.00 FALSE
5 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma LINGO4 0.24 0.00 enet 10 0.09 9.5e-06 0.56 -5.5 4.9e-08 -0.08 0.02 0.04 FALSE
6 The Cancer Genome Atlas Lung Adenocarcinoma LINGO4 0.20 0.07 lasso 4 0.07 3.7e-08 -6.79 -6.0 1.7e-09 0.00 1.00 0.00 FALSE
7 The Cancer Genome Atlas Pancreatic Adenocarcinoma LINGO4 0.32 0.09 lasso 8 0.13 3.3e-06 -6.79 -8.1 5.0e-16 -0.21 0.07 0.28 TRUE
8 The Cancer Genome Atlas Prostate Adenocarcinoma LINGO4 0.53 0.20 lasso 4 0.23 1.1e-23 -6.79 -6.2 5.6e-10 0.04 1.00 0.00 TRUE
9 The Cancer Genome Atlas Thyroid Carcinoma LINGO4 0.43 0.15 lasso 7 0.20 2.3e-19 -6.79 -6.1 9.1e-10 0.04 1.00 0.00 FALSE