Best TWAS P=4.73e-10 · Best GWAS P=2.21e-17 conditioned to 8.72e-06
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | JAZF1 | 0.04 | 0.02 | blup | 224 | 0.03 | 3.8e-06 | 7.9 | 5.4 | 5.8e-08 | 0.47 | 0.17 | 0.78 | TRUE |
2 | The Cancer Genome Atlas | Glioblastoma Multiforme | JAZF1 | 0.24 | 0.08 | blup | 222 | 0.07 | 3.3e-03 | 8.3 | 6.2 | 4.7e-10 | 0.71 | 0.01 | 0.91 | TRUE |