Best TWAS P=1e-08 · Best GWAS P=1.06e-09 conditioned to 0.0313
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ZNF652 | 0.03 | 0.03 | enet | 5 | 0.03 | 0.00026 | 5.6 | -5.7 | 1.0e-08 | -0.90 | 0.02 | 0.94 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ZNF652 | 0.06 | 0.03 | lasso | 4 | 0.02 | 0.00165 | 6.1 | -5.4 | 5.4e-08 | -0.93 | 0.01 | 0.98 | FALSE |
| 3 | The Cancer Genome Atlas | Lung Adenocarcinoma | ZNF652 | 0.05 | 0.02 | blup | 55 | 0.02 | 0.00249 | 5.9 | -5.6 | 2.7e-08 | -0.88 | 0.02 | 0.95 | FALSE |